PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023904777.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 188aa    MW: 20560.4 Da    PI: 8.5126
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023904777.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.70.00163860123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C++ F++   L  H  +H
  XP_023904777.1 38 FECKTCNRQFPSFQALGGHRASH 60
                    89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MMKREREFDH SVTVANCLML LSRGSEIEAF SNSPSRVFEC KTCNRQFPSF QALGGHRASH  60
KKPRLMGGEH GSLDSQSQGS PPKPKTHECS VCGLEFAIGQ ALGGHMRRHR AALNESQVPL  120
NLTENMQGPL SFTSSQGSAT SPLSFASSQG LSTINNRRAL CLDLNLTPFE NDLVILKLKP  180
APMVDCYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.11e-38C2H2 family protein