PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023904844.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 197aa    MW: 22246.2 Da    PI: 8.6653
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023904844.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR168.71.4e-2149145289
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk........tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87 
                     fY+e+Ak+ GF + +++skk  +++++t+r +vC  eg+r++++          ++k+rr+ ++ rtgC+a+l++ k+k  +kw+v+ ++++HnH
  XP_023904844.1  49 FYKEFAKKEGFGIHTRTSKKAPKSDNVTSRIYVCCSEGQRKTKNALdsglsrddENKARRSCSSLRTGCEAMLRIMKNKkLQKWVVKGFDNNHNH 143
                     *********************999****************99887799****9999999999*************999989************** PP

            FAR1  88 el 89 
                      +
  XP_023904844.1 144 GI 145
                     86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MEREELYDAP NNLGPSEQEL PLEDIGDCEL KSKPYVGMQF DSLDDVETFY KEFAKKEGFG  60
IHTRTSKKAP KSDNVTSRIY VCCSEGQRKT KNALDSGLSR DDENKARRSC SSLRTGCEAM  120
LRIMKNKKLQ KWVVKGFDNN HNHGIISPKS VSYLRCHKKM STAAKSLVEN FGEEGLPTRK  180
VAMMFNVGGQ TFTSRDC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-22FAR1 family protein