PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023904917.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Trihelix

Protein Properties

Length: 341aa MW: 39058.8 Da PI: 5.9259

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023904917.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	86.6	3e-27	31	112	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li +rrem+ ++++k++k+lWe++s+kmre+gf rsp++C++kw+nl k++kk k+++++ s +++y++++e XP_023904917.1 31 WVQDETRSLISLRREMDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGS---GSAKMSYYKEIE 112 ******************************************************************84...556899*998 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MILGDSSGGD EDHEVEVEVE VKAPKKRAET WVQDETRSLI SLRREMDGLF NTSKSNKHLW 60 EQISSKMREK GFDRSPTMCT DKWRNLLKEF KKAKHQDRGS GSAKMSYYKE IEEILRDRSK 120 NAQYKSPTPP KVDTYMQFSD KGIEDAGISF GPVEATGRPT LNLERRLDHD GHPLAITTAD 180 AVAASGVPPW NWRETPGNGG ESQSYCGRVI SVKWGDYTRR IGIDGSTDAI KEAIRCAFRL 240 RTKRAFWLED EDQIIRSLDR DMPLGNYMLH LDEGLAIKVC LYDESDHIPA MHTEDKIFYT 300 EDDYRNFLSQ RGWSCLRELD GYRNIDSMDD LRPGAIYRGV S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	0.0	Trihelix family protein