PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023904918.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family Trihelix
Protein Properties Length: 278aa    MW: 31718.6 Da    PI: 6.5292
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023904918.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix87.12e-2731112286
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     W ++e++ Li +rrem+  ++++k++k+lWe++s+kmre+gf rsp++C++kw+nl k++kk k+++++     s +++y++++e
  XP_023904918.1  31 WVQDETRSLISLRREMDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGS---GSAKMSYYKEIE 112
                     ********************************************************************84...556899***998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MILGDSSGGD EDHEVEVEVE VKAPKKRAET WVQDETRSLI SLRREMDGLF NTSKSNKHLW  60
EQISSKMREK GFDRSPTMCT DKWRNLLKEF KKAKHQDRGS GSAKMSYYKE IEEILRDRSK  120
NAQYKSPTPP KVDTYMQFSD KGIEDAGISF GPVEATGRPT LNLERRLDHD GHPLAITTAD  180
AVAASGVPPW NWRETPGNGG ESQSYCGRVI SVKWGDYTRR IGIDGSTDAI KEAIRCAFRL  240
RTKRAFWLED EDQIIRSLDR DMPLGNYMLH LDEEMLNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13450.11e-152Trihelix family protein