PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023904938.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 725aa MW: 83946.3 Da PI: 8.0385

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023904938.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75	1.5e-23	24	114	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fYn+YAk vGFs+rk++ k++k+n +t+r++vC keg r ++++++ + r+r+ tr gCka ++++ e+ g+w+v +++ eHnH+l+p XP_023904938.1 24 EFYNTYAKLVGFSIRKDEIKRNKDN-IVTSRRWVCAKEGLRIRKNESNLNCMRERPITRSGCKAAFRIRFERkLGEWVVGEFKREHNHDLVP 114 6***************9999555.5***********999999999**************99989*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 725 aa Download sequence
KGVDQLTDAQ ITSLKFNSLD DGGEFYNTYA KLVGFSIRKD EIKRNKDNIV TSRRWVCAKE 60 GLRIRKNESN LNCMRERPIT RSGCKAAFRI RFERKLGEWV VGEFKREHNH DLVPQLETQF 120 LRSHRTIKDS DKAQIMALHN VGVKSNQIMD HMIQQAGGYE NIGFTSKDLY NYLATIRNNS 180 TRDGDAECAL AYLQAKADMD SSFFFQYTTD EESRLANLFW TDSQSRLDYA CFGDVVAFDT 240 TYKTNVYKKP LVILVGVNHH RQTIVFGFGL LVDETIETYT WVLQNMLVAM NNKTPISVVT 300 DGDKAMSKAI KTVFPKSRHR LCVWHLERNA FANLHDKVYE SFIRCMVRYV TPDEFEDMWK 360 KMVDNYNLHN HEWLHEMYAK KMKWAEAYMR GHFFSGCRST QRCEAMNAFL NRFLDRKTRL 420 YELFQQVDRA LSRIRHNEMG ADFSSNYTEP ILITGLAEIE KHAATIFTRE IFSMVQEELL 480 NEQKFIVLYY IDKEGYRTYT LSQYASPDSR WEVEYCQADQ SMKCSCLLFE SYGYPCGHLF 540 AIMKVEHLKQ IPPTCIMDRW LKTAKSDLPC KLESQISPDI IRMARFSALS ASCSQMCYFG 600 SRTTQGFEEL KVEIARLTRR MEELYNSSKE AAEDGIRTAS NKANLNVRDP AIVKTKGDHG 660 STSNSHNHAK VRRCSSCKDV GHTRRTCPST HIQQGERVDG DNVPESMEHP AFGSPDLETN 720 FYNFL

Sequence ? help Back to Top

Protein Sequence Length: 725 aa Download sequence

KGVDQLTDAQ ITSLKFNSLD DGGEFYNTYA KLVGFSIRKD EIKRNKDNIV TSRRWVCAKE  60
GLRIRKNESN LNCMRERPIT RSGCKAAFRI RFERKLGEWV VGEFKREHNH DLVPQLETQF  120
LRSHRTIKDS DKAQIMALHN VGVKSNQIMD HMIQQAGGYE NIGFTSKDLY NYLATIRNNS  180
TRDGDAECAL AYLQAKADMD SSFFFQYTTD EESRLANLFW TDSQSRLDYA CFGDVVAFDT  240
TYKTNVYKKP LVILVGVNHH RQTIVFGFGL LVDETIETYT WVLQNMLVAM NNKTPISVVT  300
DGDKAMSKAI KTVFPKSRHR LCVWHLERNA FANLHDKVYE SFIRCMVRYV TPDEFEDMWK  360
KMVDNYNLHN HEWLHEMYAK KMKWAEAYMR GHFFSGCRST QRCEAMNAFL NRFLDRKTRL  420
YELFQQVDRA LSRIRHNEMG ADFSSNYTEP ILITGLAEIE KHAATIFTRE IFSMVQEELL  480
NEQKFIVLYY IDKEGYRTYT LSQYASPDSR WEVEYCQADQ SMKCSCLLFE SYGYPCGHLF  540
AIMKVEHLKQ IPPTCIMDRW LKTAKSDLPC KLESQISPDI IRMARFSALS ASCSQMCYFG  600
SRTTQGFEEL KVEIARLTRR MEELYNSSKE AAEDGIRTAS NKANLNVRDP AIVKTKGDHG  660
STSNSHNHAK VRRCSSCKDV GHTRRTCPST HIQQGERVDG DNVPESMEHP AFGSPDLETN  720
FYNFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-115	FAR1 family protein