PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023905020.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 771aa MW: 88883.7 Da PI: 8.4495

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023905020.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.5	3.4e-21	52	138	2	90
FAR1 2 fYneYAkevGFsvrkskskkskr.ngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +Yn YA vG s+r++ ++sk +++i++r+f+C k g+++e + +++r+e r+gC+a+++++++k+gk+++t +e +HnHe++ XP_023905020.1 52 YYNIYAGYVGLSIRRDWLNRSKVdKTTIISRKFCCFKAGYKKEVAYD---GKKSRMELRCGCEAQMVISRQKSGKYRITLFEAKHNHEVV 138 8***************99965156799**********9888...999********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 771 aa Download sequence
MEKDGKSNLE EVVSIDSEED TTPKIGENED TKEDITPKIG MEFDSEDEAY LYYNIYAGYV 60 GLSIRRDWLN RSKVDKTTII SRKFCCFKAG YKKEVAYDGK KSRMELRCGC EAQMVISRQK 120 SGKYRITLFE AKHNHEVVTP RSKHKLPSQR KISAAQAAEA ELANRSGIRQ KLVFDFMSKQ 180 AGGRENLGFT LKDISNHLQS KRMREMKEGE AFTLIHYFEM RKSENASFFY EIQLDVDDQI 240 TNIFWADPKM VVDYDLFGDV VCFDTTYRTN KNHRPLAPII GVNHHRQTVV FGAALLYDET 300 AETFSWLFRT LLKAMCGKKP VTIFTDQDPA MAKAIVEVLP ESHHHLCRWH IYQNALKKLN 360 RYFQSSNSFA AEFKSCMCDH EYEDDFFQAW ESMLDKHGLQ ENSWLKFIFE VREKWAMVYG 420 RNHFCANITT TQLSESFNSR LRHYLKSTNN VLEFFSHFES LLEDLRHNEL DSNYDMSQRL 480 PVLRVEVLLL KNSRDVYTPK IFNFFQEEYK KSLDMVVNTC YDISPLFEYK VCMYGHTREH 540 KVIFNSTDQT VVCSCKKFEF AGFLCSHALK VLDIQNIKLL PSRYILKRWT KQARVGCVLD 600 SYGCIVKEDP KLDITNRYKD LCRNAVNIAS KAAETEEASM FLAKKMVELN LDLERILKKK 660 TDLPSNKIGM DPSHNEHVDV ASVITAHKAT GIKKKIGTSR VKGRPKSFIE KGSRKRRRPS 720 GEIPVTSTTV NIPASLSVDY TQVTQVLLDF CTGFSALGTA GFLHSALVSL Q

Sequence ? help Back to Top

Protein Sequence Length: 771 aa Download sequence

MEKDGKSNLE EVVSIDSEED TTPKIGENED TKEDITPKIG MEFDSEDEAY LYYNIYAGYV  60
GLSIRRDWLN RSKVDKTTII SRKFCCFKAG YKKEVAYDGK KSRMELRCGC EAQMVISRQK  120
SGKYRITLFE AKHNHEVVTP RSKHKLPSQR KISAAQAAEA ELANRSGIRQ KLVFDFMSKQ  180
AGGRENLGFT LKDISNHLQS KRMREMKEGE AFTLIHYFEM RKSENASFFY EIQLDVDDQI  240
TNIFWADPKM VVDYDLFGDV VCFDTTYRTN KNHRPLAPII GVNHHRQTVV FGAALLYDET  300
AETFSWLFRT LLKAMCGKKP VTIFTDQDPA MAKAIVEVLP ESHHHLCRWH IYQNALKKLN  360
RYFQSSNSFA AEFKSCMCDH EYEDDFFQAW ESMLDKHGLQ ENSWLKFIFE VREKWAMVYG  420
RNHFCANITT TQLSESFNSR LRHYLKSTNN VLEFFSHFES LLEDLRHNEL DSNYDMSQRL  480
PVLRVEVLLL KNSRDVYTPK IFNFFQEEYK KSLDMVVNTC YDISPLFEYK VCMYGHTREH  540
KVIFNSTDQT VVCSCKKFEF AGFLCSHALK VLDIQNIKLL PSRYILKRWT KQARVGCVLD  600
SYGCIVKEDP KLDITNRYKD LCRNAVNIAS KAAETEEASM FLAKKMVELN LDLERILKKK  660
TDLPSNKIGM DPSHNEHVDV ASVITAHKAT GIKKKIGTSR VKGRPKSFIE KGSRKRRRPS  720
GEIPVTSTTV NIPASLSVDY TQVTQVLLDF CTGFSALGTA GFLHSALVSL Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	714	718	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-130	FAR1 family protein