PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023905120.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 524aa MW: 56751.8 Da PI: 7.8495

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023905120.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.3	9.8e-31	283	341	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ XP_023905120.1 283 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDKTILTTTYEGNHNHP 341 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MENQDRREFT FLGSGGGGGG NNNDFLRGGP HTKPMMIKEV DFFSNSSRES ARNNNNKPHD 60 HNHDETAVVK DIGSSTHQVS DPAGVNTGLN LHTPSSGMLK SAYDQEKPNT ELIRLRGELD 120 RLHDENGKLR GMLDQITKSY SELQGQLLMA MQKQAQEYHQ GQKVEPNGMS GQMISAQQIM 180 DPRPLTALDV NDPSVSDDNK TQELSVSLSN TMEVMSKERD RHMIKVPRKQ TCTEEGLDQS 240 SQSWGSPKSP KLDEAKGEEQ APEVPFRKAR VSVRARSDAP LISDGCQWRK YGQKMAKGNP 300 CPRAYYRCTM AAGCPVRKQV QRCAEDKTIL TTTYEGNHNH PLPPAATAMA NTTSAAAAML 360 LSGSTTSKEA VTISGFFPPS MPYVSTMATL SASAPFPTIT LDLTQSPGCN PMQLLHRIPS 420 PSATFPLPLH GVPPQLLGHP MYFPPKLPAP QVLGQRHSHT SMVETVTAAI ASDPNFTAAL 480 AAAISTIMRA PRNNDGSTNP TNGVPAGLPG SPQLPQSCTT FSTN

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MENQDRREFT FLGSGGGGGG NNNDFLRGGP HTKPMMIKEV DFFSNSSRES ARNNNNKPHD  60
HNHDETAVVK DIGSSTHQVS DPAGVNTGLN LHTPSSGMLK SAYDQEKPNT ELIRLRGELD  120
RLHDENGKLR GMLDQITKSY SELQGQLLMA MQKQAQEYHQ GQKVEPNGMS GQMISAQQIM  180
DPRPLTALDV NDPSVSDDNK TQELSVSLSN TMEVMSKERD RHMIKVPRKQ TCTEEGLDQS  240
SQSWGSPKSP KLDEAKGEEQ APEVPFRKAR VSVRARSDAP LISDGCQWRK YGQKMAKGNP  300
CPRAYYRCTM AAGCPVRKQV QRCAEDKTIL TTTYEGNHNH PLPPAATAMA NTTSAAAAML  360
LSGSTTSKEA VTISGFFPPS MPYVSTMATL SASAPFPTIT LDLTQSPGCN PMQLLHRIPS  420
PSATFPLPLH GVPPQLLGHP MYFPPKLPAP QVLGQRHSHT SMVETVTAAI ASDPNFTAAL  480
AAAISTIMRA PRNNDGSTNP TNGVPAGLPG SPQLPQSCTT FSTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01720.1	4e-94	WRKY family protein