PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023905138.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 335aa    MW: 36467 Da    PI: 8.8079
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023905138.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.31.1e-18248281134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C +tkTp+WR+gp g+ktLCnaCG+++r+ +
  XP_023905138.1 248 CMHCEVTKTPQWREGPMGPKTLCNACGVRFRSGR 281
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MAGSSLFDDN INGVLDENFD DIFRIFDFPL EDVEGNVGVE DWNVKFQALE QPSLDFLTSY  60
SYGPSPKNGN DALKFANGND AVKFPEVVNI STLHDETSPL KGLPVTVEAT SSRSALLHRS  120
SDVKGLRLFQ TSSPVSVLES SSSCSVENPT TVDPKTTIPV KRARNKRPRP SKSNSQFRVP  180
FFCSASSASK ISHPSAAFES GSETSDLSET ASNPSKKKMR KKKNLSVLSG ATEMGNFSSE  240
EPVATRKCMH CEVTKTPQWR EGPMGPKTLC NACGVRFRSG RLFPEYRPAA SPTFVSSLHS  300
NSHKKVVEMR KKGSFGARMA DMDTLSSSMP TVSTG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166170KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.29e-46GATA family protein