PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023905560.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GRAS
Protein Properties Length: 738aa    MW: 83416.2 Da    PI: 6.3055
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023905560.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS390.41.9e-1193597301374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL+ cA+av+++d++ ++++L+++++++sp gd mqR+a+yf+ +L+ar+a+s++++y al  + ts    +++l+a++lf  ++P+ k+s+
  XP_023905560.1 359 LRTLLTICAQAVAANDQRTTNEVLKQIRQHSSPLGDGMQRMAHYFADGLEARIAGSGTQIYTALIGRLTS---AADVLKAYHLFLAACPFKKLSN 450
                     5789************************************************************999999...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +  N++I++ +e+++r+Hi+Df+i +G+QWp+L+q L+sRp+gpp+lRiTg++ p++g   +e++eetg+rL+k+Ae+++vpfefn+ +ak +++
  XP_023905560.1 451 FFSNKTIMNLAEKKTRLHIVDFGILYGFQWPSLIQRLSSRPGGPPKLRITGIDLPQPGfrPAERVEETGRRLTKYAETFNVPFEFNA-IAKWWDT 544
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++e+L+++++E+l+Vn++ +l +llde+v +es+rd+vLkl+++++P+v++    +   n++ F +rf eal +ys++fd+le+ +pre+eer 
  XP_023905560.1 545 IQIEDLKLDSDEVLVVNVIWRLRNLLDETVMVESPRDNVLKLMRKMNPDVLIQGTVNGTFNAPFFITRFREALFHYSTVFDMLETIVPRETEERL 639
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +Ere++gre++nv+acegaer+er et+++W  r  +aGF+++pl+ ++++ ak  ++  + + + ++e+ ++l++gWk+r L+++S W+
  XP_023905560.1 640 LIEREIFGREAMNVIACEGAERIERPETFKQWTVRNLRAGFRQLPLNREIVNLAKDRVKSLYRKDFLIDEDGEWLLQGWKGRILFALSTWK 730
                     **************************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 738 aa     Download sequence    
MFMGQHLRGI CGSTKGLKLN DETLYGFKMD STIVDKNYSS NPLLPSDPIP SNPSVSLDGI  60
SNEDCDFSDV VLRYINQMLM EEDMEEKACM FQEALQDTEK SLYEALGKKY PPGPDNGLPP  120
YVGQNHETQD ENYALNHIDY NSSTSSASGD NLVDTGWVCD SGEHKSSYIT TQSTSQSPYS  180
SSHSPGNVID GIVDSPVSTL RVPEIFYDNE SIMQFKRGFE EASKFLPNGN GLIVDLESNG  240
LSSKELQENA KDTVFKVEYK HESQHFLDGL RGRKNRHPEG VNLEGGRSNK QSVVYTESTV  300
TSEMFDRVLL NFGKDESDLR QALQNGKSKN VQQNGQSKGS NSVKARGKKK GGKRDVVDLR  360
TLLTICAQAV AANDQRTTNE VLKQIRQHSS PLGDGMQRMA HYFADGLEAR IAGSGTQIYT  420
ALIGRLTSAA DVLKAYHLFL AACPFKKLSN FFSNKTIMNL AEKKTRLHIV DFGILYGFQW  480
PSLIQRLSSR PGGPPKLRIT GIDLPQPGFR PAERVEETGR RLTKYAETFN VPFEFNAIAK  540
WWDTIQIEDL KLDSDEVLVV NVIWRLRNLL DETVMVESPR DNVLKLMRKM NPDVLIQGTV  600
NGTFNAPFFI TRFREALFHY STVFDMLETI VPRETEERLL IEREIFGREA MNVIACEGAE  660
RIERPETFKQ WTVRNLRAGF RQLPLNREIV NLAKDRVKSL YRKDFLIDED GEWLLQGWKG  720
RILFALSTWK PTSEAHNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein