PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023905631.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 236aa MW: 26551.4 Da PI: 4.4514

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023905631.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.5	5.4e-17	10	55	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E+el+ +++k+lG++ W++Ia +++ gRt++++k++w++yl XP_023905631.1 10 RGNISQDEEELIMRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSYL 55 7899****************.*****.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MNYLRPDIKR GNISQDEEEL IMRLHKLLGN RWSLIAGRLP GRTDNEIKNY WNSYLAKKTQ 60 DQIPSPKSRT DQKKPTIRVH HESDALLEGK GVLVSAQHHV DDDQIHETKV PIFLTPTVET 120 NMVKIKSSIS ESSAGSPSTS KEENMSDFIL DLSSDDFCKM LDSDFAKLSD VDINELHNIA 180 IEGDKDSLLV LSEETENNGR ESGQLNNSNM VSDFQSLFLD SDDGWLGDDL NIAFSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	2e-30	MYB family protein