PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023905719.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family SRS
Protein Properties Length: 371aa    MW: 41719.7 Da    PI: 9.131
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023905719.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70225.53.8e-084077542
          DUF702  5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkst 42
                    + +Cq CGn a+  C ++ C+ CC      C  hv   
  XP_023905719.1 40 KPKCQICGNVARSRCPFKSCKSCCSRDQNPCPIHVLKA 77
                    569*********************99999*****9543 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MAATSPALTN NNNNTTTTTT ATNMAHRTDT PPKTLRGLNK PKCQICGNVA RSRCPFKSCK  60
SCCSRDQNPC PIHVLKANAT IPDKAPNSST SMFDHQGTEA SPSGSVHRVA SFRQLSNTFS  120
QFNNVQIPSR SRKPLTRKDA AVINEWRFSK IKEFKDRNFE VENEGFDRYM QNISLLEEVF  180
SMKSILERSN GDEPTISNPN PTSTEDNTEL MVSGLKLQLR SNSIRTDSFR RRVQQIVDRG  240
LKKLQKRALD DGNNDQSGKD ESHGPKRAKS LKPERALAVS DLIDKLNKAR TEEDLKSCID  300
MKLQIFNRNT ISNQTEIEDA APKDQNPKTD LEPRKESSFS SKKIISTTEL DQETLNKIDA  360
HFSTLEQIED L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1241247LKKLQKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32730.18e-97SRS family protein