PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023905760.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 228aa    MW: 25385.2 Da    PI: 10.5984
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023905760.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.71e-13128218198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f k + +s+v    +l lp ++++e +++++ +   tl de+g  +  k+  +k++    l++GWk+F+ a++L  gD +vF+l+gr++f  +v 
  XP_023905760.1 128 FTKSMQSSHVAGGFWLGLPSTYFSERNLPSH-DAIKTLIDEDGDGYPTKYLAKKSG----LSGGWKGFAVAHHLAYGDALVFQLMGRTTF--KVY 215
                     889999*****************99987754.4577999***********544444....9*************************9888..777 PP

                     EE- CS
              B3  96 vfr 98 
                     ++r
  XP_023905760.1 216 IVR 218
                     766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MVVAKRSYED SRRKRVEENK KRMEALNLPL LSQALKTSSS PKPSPKKQAK PRVAQKLVVE  60
VRRSTRFVNK PAPIYKEVDV DRVAIPRRVF GRKRNLSNLI LASSESEAEA EEQAGKLVWG  120
LPPGCPIFTK SMQSSHVAGG FWLGLPSTYF SERNLPSHDA IKTLIDEDGD GYPTKYLAKK  180
SGLSGGWKGF AVAHHLAYGD ALVFQLMGRT TFKVYIVRVN GSEEGNKL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11250RRKRVEENKKRMEALNLPLLSQALKTSSSPKPSPKKQAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.11e-61B3 family protein