PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023905801.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 227aa    MW: 25245.2 Da    PI: 10.4889
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023905801.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.95.1e-15129215498
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                      + ps+v    +l lp +f++ + +++ ++  +tl de+g ++   +  rk++    l++GWk+F+ a++L  gD vvF+l+gr++f  +v ++r
  XP_023905801.1 129 SMQPSHVAGGFWLGLPVDFCKLN-LPS-RDDVMTLIDEDGDEYPTIYLARKRG----LSGGWKGFAVAHHLVHGDAVVFQLIGRTTF--KVYIIR 215
                     578999**************666.443.4558***************555555....9*************************9988..888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MVVAKQSYED SRRKRVEENK KRMEALNLPL LSQALKTSPK PSPTKQAKPR VVEKQLVVVR  60
RSTRFANKPA PIYKEVAVDR VAIPRRILGR QRNLSNLVLA SPEAIAEADE KAEKLVLGLP  120
PGYPILTRSM QPSHVAGGFW LGLPVDFCKL NLPSRDDVMT LIDEDGDEYP TIYLARKRGL  180
SGGWKGFAVA HHLVHGDAVV FQLIGRTTFK VYIIRVNGSE EGNNGAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.11e-68B3 family protein