PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023906252.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 739aa MW: 85705 Da PI: 8.0745

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023906252.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	87.2	2.4e-27	50	136	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +YneYAkevGFs+rk+ +++ + +g i +r+fvC+keg+r+++k+ + +++r+etrtgC a+l+++++ +gk++v+++e++HnHel+ XP_023906252.1 50 WYNEYAKEVGFSIRKQWKNEDRFSGVISSRRFVCYKEGYRKKDKRV--DVKKPRKETRTGCLARLTISLQANGKYRVIDFESNHNHELV 136 7***************************************9877..999**********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 739 aa Download sequence
MPIISDEQIC PEGDKENEDI YANIMQNSDC QGKISVWKME FDSEEHAHQW YNEYAKEVGF 60 SIRKQWKNED RFSGVISSRR FVCYKEGYRK KDKRVDVKKP RKETRTGCLA RLTISLQANG 120 KYRVIDFESN HNHELVDKSC VHMLPSQRII TDVQAIEIEL ADNSGIPPKL AHELMSRQVG 180 GRENLGFTKQ DHKNYLRTKR KRDLQQGEVG GLLNYFLSQV SENPSFFFRV QLDVEDQITN 240 IFWADAKMIF DYGIYGDVVF FDTTYRTNKE CRPFGAFVGV NHHYQLVVFG ASLLYDETTQ 300 SFEWLFHTFL ECMSGKKPKT IFTDRDPAMA KAISLVMLET YHRLCLWHIY QNALKNLNHL 360 FKSQKTFNAV FRSCIYDGEY EEEFISAWEN MLEKYDLQEN EWLQDLFKVR EKWAMVYGRN 420 TFSAGKKSTQ LSESFNSLLK DYLKSDLDIV QFFKHFQRAV DDVRYNEVRA NYDMSQKIPT 480 LKVNVPLLRH ARDIYTGAVF SMFQDEFEKS LMVVVDTFHQ SGLVSTYKIH NCEGSRQHTV 540 TSSNGLITCS CKNFEFVGII CSHILKVLDE MKIKLMIPEQ FILKRWTKNA RAGIVLDIHE 600 CEVQSDPRLE MRARYRNLCT TYVRLMGKAA ESKEASDFLL SLAAELDAKL EEYLKIESPS 660 ETLMPSSTSC ENQVVKSTCT IQAKGLKRRE VSRGRKRLKG EGVMPKTKSF FCTAMSSISF 720 NLEAYAIAKL LASSGYLKL

Sequence ? help Back to Top

Protein Sequence Length: 739 aa Download sequence

MPIISDEQIC PEGDKENEDI YANIMQNSDC QGKISVWKME FDSEEHAHQW YNEYAKEVGF  60
SIRKQWKNED RFSGVISSRR FVCYKEGYRK KDKRVDVKKP RKETRTGCLA RLTISLQANG  120
KYRVIDFESN HNHELVDKSC VHMLPSQRII TDVQAIEIEL ADNSGIPPKL AHELMSRQVG  180
GRENLGFTKQ DHKNYLRTKR KRDLQQGEVG GLLNYFLSQV SENPSFFFRV QLDVEDQITN  240
IFWADAKMIF DYGIYGDVVF FDTTYRTNKE CRPFGAFVGV NHHYQLVVFG ASLLYDETTQ  300
SFEWLFHTFL ECMSGKKPKT IFTDRDPAMA KAISLVMLET YHRLCLWHIY QNALKNLNHL  360
FKSQKTFNAV FRSCIYDGEY EEEFISAWEN MLEKYDLQEN EWLQDLFKVR EKWAMVYGRN  420
TFSAGKKSTQ LSESFNSLLK DYLKSDLDIV QFFKHFQRAV DDVRYNEVRA NYDMSQKIPT  480
LKVNVPLLRH ARDIYTGAVF SMFQDEFEKS LMVVVDTFHQ SGLVSTYKIH NCEGSRQHTV  540
TSSNGLITCS CKNFEFVGII CSHILKVLDE MKIKLMIPEQ FILKRWTKNA RAGIVLDIHE  600
CEVQSDPRLE MRARYRNLCT TYVRLMGKAA ESKEASDFLL SLAAELDAKL EEYLKIESPS  660
ETLMPSSTSC ENQVVKSTCT IQAKGLKRRE VSRGRKRLKG EGVMPKTKSF FCTAMSSISF  720
NLEAYAIAKL LASSGYLKL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	694	700	GRKRLKG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-125	FAR1 family protein