PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023906337.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 184aa    MW: 21015.4 Da    PI: 10.267
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023906337.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR145.62.4e-1437122291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     +Y +YAk++ F v+k++sk   ++g+ +  t  C ++gk++++ ++   + ++r++++ gCkak++ +    gk+ +t+++l+H H+l+p
  XP_023906337.1  37 YYMQYAKQASFGVSKRTSKLG-HDGNLKYFTISCVNQGKAKSKATN---ALKQRPKKNLGCKAKINATCCPGGKFTLTTIVLDHVHTLSP 122
                     8*************9998776.8999***************99887...9999**********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MIEEKKHEIN KILDENEIVL EPKVGMMFNS EEEVRAYYMQ YAKQASFGVS KRTSKLGHDG  60
NLKYFTISCV NQGKAKSKAT NALKQRPKKN LGCKAKINAT CCPGGKFTLT TIVLDHVHTL  120
SPRKARYFRC HKQMDSYVKR RLELNDKAGI RISKNYKSIV IEAGGFEKLP FGEKDCRNHV  180
DKAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-16FAR1 family protein