PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023906346.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 159aa    MW: 17740.4 Da    PI: 8.8698
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023906346.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-193081256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+G+r+++ +g+++AeIrdps ng  +r +lg+f+taeeAa+a+++a+  ++g+
  XP_023906346.1 30 RYRGIRRRP-WGKFAAEIRDPSRNG--ARLWLGTFDTAEEAARAYDRAAFGFRGH 81
                    69*******.**********98887..**********************988886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MSHFIFETQN TNMNGKRVGN EEKGNSNEVR YRGIRRRPWG KFAAEIRDPS RNGARLWLGT  60
FDTAEEAARA YDRAAFGFRG HLAILNFPNE YQYQNPSSSS SNSRTFPSSS SSSARGKSFG  120
KVGSSTGQEG EVIEFEYLDN KLLDELLETH GDIGKGFGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.11e-33ERF family protein