PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023906382.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB
Protein Properties Length: 300aa    MW: 34276.5 Da    PI: 8.877
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023906382.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.71.3e-082873346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     +WT eE +++ +a +++ ++   +W +Ia++++ g+t  ++   ++ 
   XP_023906382.1 28 NWTLEENKRFENALALYDKDtpdRWLRIAAMIP-GKTVGDVMKQYRE 73
                     8********************************.****999998875 PP
2Myb_DNA-binding461.2e-14135179347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + k++G+g+W+ Iar   ++Rt+ q+ s+ qky
   XP_023906382.1 135 PWTEEEHRQFLLGLKKYGKGDWRNIARNYVTTRTPTQVASHAQKY 179
                      7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MNPEIEIQSP ASYLQNSNWL YQESKGTNWT LEENKRFENA LALYDKDTPD RWLRIAAMIP  60
GKTVGDVMKQ YRELEEDVSD IEAGLIPIPG YGSNSFTLEW VNNQGFGDLK QFYSVGGKRG  120
ASTRPSDQER KKGIPWTEEE HRQFLLGLKK YGKGDWRNIA RNYVTTRTPT QVASHAQKYF  180
IRQLSGGKDK RRSSIHDITI VNVPETKSPS SDGKRSPSPD HCAMVMQPQQ HLEMGVISRQ  240
QPYDWKTPYE ATTMAFNPAN VNMFMKPFCG ISSYGPNLQE QNLFRSTLHG SQFGPYNTMF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-122MYB family protein