PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023907184.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 352aa    MW: 36881.3 Da    PI: 6.4399
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023907184.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.14.2e-10201245554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     h+++Er RR+ri +++  L+el+P+a      K + a++L + v+Y+k L
  XP_023907184.1 201 HSIAERLRRERIAERMKALQELVPSA-----NKTDRAAMLDEIVDYVKFL 245
                     99***********************8.....6****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MAGNPPEGLG DDFFEQILAV QPTYTTSEAA AVAGYGGGEV GSMPMVLQLG SGGGGGGGGG  60
DGGGGGGSGG GGGLRGMNLG MGMAPPMGLN LERQQQHGGF LRQERFREEV VDGNHSNSHI  120
NNGSSSSATH GISERDSVHM TSLFPAFGQM QAQSLRPTAP PPSQLHQFHS QPTHGPGVAA  180
PHPPGIRPRV RARRGQATDP HSIAERLRRE RIAERMKALQ ELVPSANKTD RAAMLDEIVD  240
YVKFLRLQVK VLSMSRLGGA GAVAQLVADV PLSSVEGEGI EGGTNQQAWD KWSNDGTEQQ  300
VAKLMEEDVG AAMQFLQSKA LCIMPISLAS TIFRSHQPDA PTLVKPESNT PS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1206211RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.32e-70bHLH family protein