PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023907463.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YC
Protein Properties Length: 263aa    MW: 29378 Da    PI: 9.095
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023907463.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC45.91.2e-141392251796
           NF-YC  17 knhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeen.......krrtlkksdiaaavtrtdifdflvdiv 96 
                      ++++P+arik+i++aded+ +++  +P ++s+a elf+++l   s  +ae++        ++ +  + ++ a+  td+fdfl +i 
  XP_023907463.1 139 LKTQFPVARIKRIMQADEDIGKVAQVTPHVVSRALELFMIKLITASAEQAESTggagsgkGQKRILCQHMKRAIMATDTFDFLHEIA 225
                     4789*****************************************99999976222222124455667899************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MDSNSYAPRS PDLSGLIQPP LQPQQQQQQQ QQQQYSQSHN PYGMTYASNS YLQYPQATSI  60
PNSYPYDYDQ QYLPQPAHPQ HQQQYIMDPG MHMKTEPHDQ AMPDVPVHAR GRKVQSMPQQ  120
YAPDIKSQPP ADPTHGVVLK TQFPVARIKR IMQADEDIGK VAQVTPHVVS RALELFMIKL  180
ITASAEQAES TGGAGSGKGQ KRILCQHMKR AIMATDTFDF LHEIAGKVPD APSKAKKEAG  240
SDSEEAKPAK KRTKKRKDSG DDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19490.14e-20NF-YC family protein