PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023907574.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 266aa MW: 30559.5 Da PI: 5.3832

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023907574.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162.6	1.4e-50	10	138	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF P+deelv++yL kk++++++ ++ e+d++++ePw+Lp+ +k + +ewyfFs rd+kyatg r+nrat+sgyWkatgkd++vl+ XP_023907574.1 10 LPPGFRFYPSDEELVCHYLYKKITNEEVLK-GTLMEIDLHTCEPWQLPEVAKLNATEWYFFSFRDRKYATGLRTNRATTSGYWKATGKDRTVLDP 103 79**********************9655.78***********88888999**********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 ++e vg++ktLvfy++rap+g kt W+mhe+rle XP_023907574.1 104 mSREIVGMRKTLVFYRNRAPNGIKTGWIMHEFRLE 138 78888*************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MGLRDIGATL PPGFRFYPSD EELVCHYLYK KITNEEVLKG TLMEIDLHTC EPWQLPEVAK 60 LNATEWYFFS FRDRKYATGL RTNRATTSGY WKATGKDRTV LDPMSREIVG MRKTLVFYRN 120 RAPNGIKTGW IMHEFRLETP HMPPKEDWVL CRVFHKSKGM APNLEDSNQL MFETTSCGPT 180 SQTMPCGYNQ MTSFASTPSH HNQSNSLLNL LQFSQGTDTN NEITSKGDDD YGFLWDMNME 240 EESLGNGAPS NLEEMRFEID NGMVFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28530.1	3e-92	NAC family protein