PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023907643.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 215aa MW: 24392.5 Da PI: 8.2059

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023907643.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.2	1.6e-17	9	56	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd +l d+++ +G+g W++Ia++ g++R++k+c++rw +yl XP_023907643.1 9 KGLWTVEEDRILMDYIRVHGKGKWNRIAKMTGLKRCGKSCRLRWINYL 56 678*******************************************97 PP
2	Myb_DNA-binding	56.9	4.9e-18	62	107	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++++++ G++ W++Ia +++ gRt++q+k++w+++l XP_023907643.1 62 RGDFSEEEEDLIIRLHNLIGNR-WSLIAGRVP-GRTDNQVKNHWNTHL 107 899*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MEARNEYRKG LWTVEEDRIL MDYIRVHGKG KWNRIAKMTG LKRCGKSCRL RWINYLSPSV 60 KRGDFSEEEE DLIIRLHNLI GNRWSLIAGR VPGRTDNQVK NHWNTHLSKK LGIKKGKTKT 120 NASLPSLSRN SGKNPSDLME SNSEPPSDCT CETGGKTMVE DGSQSTFKFA STQEITEDNN 180 CGSSLWFSND DLNLLTPYLM EPLDGYSLDF VLDGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	1e-68	MYB family protein