PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023907751.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 465aa MW: 50484.8 Da PI: 5.1851

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023907751.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.7	7.7e-31	240	298	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ XP_023907751.1 240 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 298 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MSISLFMSRM DNYQGDLTDI VRASGGPYGC ITGNSSQPIS EWQFPSDPMI FSSIQEQPRD 60 NFGDPFSNMR DPLLNELHLS SSSSFFGSSN SADVIGTATS SVEESHTSGF TGLLHVDVGG 120 GVGSSSSSTS VNVLDHDEMK RPCNIFSRML QISPNNAKLS VSPCGSPVMA RGIKAPAMLP 180 SDILSVPNSS KPCFIDNTAV QISSPRNPGI KRRKSQAKKV VCIPAPAAAN SRPSGEVVPS 240 DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CSARKQVERS RTDPNMLVIT YTSEHNHPWP 300 TQRNALAGST RSQPSKTNVT SKNSLGAQLA QKPTSPKEEQ RESSNDNNVS SVIAGSSATS 360 ASVKEEIEDI DKQLEMDNDG EFSNDQGFDY RPAMIVGSNQ SDQDFFAELE EIETDPLDLL 420 FNQGFTGDHE QKESKAMDPF SLFDWPSGDN NTNTTNSFGE AKRGL

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MSISLFMSRM DNYQGDLTDI VRASGGPYGC ITGNSSQPIS EWQFPSDPMI FSSIQEQPRD  60
NFGDPFSNMR DPLLNELHLS SSSSFFGSSN SADVIGTATS SVEESHTSGF TGLLHVDVGG  120
GVGSSSSSTS VNVLDHDEMK RPCNIFSRML QISPNNAKLS VSPCGSPVMA RGIKAPAMLP  180
SDILSVPNSS KPCFIDNTAV QISSPRNPGI KRRKSQAKKV VCIPAPAAAN SRPSGEVVPS  240
DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CSARKQVERS RTDPNMLVIT YTSEHNHPWP  300
TQRNALAGST RSQPSKTNVT SKNSLGAQLA QKPTSPKEEQ RESSNDNNVS SVIAGSSATS  360
ASVKEEIEDI DKQLEMDNDG EFSNDQGFDY RPAMIVGSNQ SDQDFFAELE EIETDPLDLL  420
FNQGFTGDHE QKESKAMDPF SLFDWPSGDN NTNTTNSFGE AKRGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30650.1	2e-96	WRKY family protein