PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023907847.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 271aa    MW: 29555.1 Da    PI: 6.876
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023907847.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.4e-1185131354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+e+ErrRR+riN  + +Lr+l+P        K++Ka+ L +++  +++L
  XP_023907847.1  85 KSHSEAERRRRERINAHLTTLRTLVPCT-----DKMDKATLLAEVISRVNEL 131
                     58*************************7.....6********9999877666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MGSYSYNSKN SSYVYNNQNP SFGPEFQRLF DPSSNSLGGF NGVLRGGSAL SHSLVLDSEK  60
GELVKAPARV GKKGVSEAKA LAALKSHSEA ERRRRERINA HLTTLRTLVP CTDKMDKATL  120
LAEVISRVNE LKKTACEESQ GFLIPMDDDE VKVEQCDDGA EDGAVSYRAS LCCDYRPQLL  180
SDLRQAIDNL QIELVKSEIS TLGSRVKNAF VYTCCQGENI DSQGIANSVH EALNSVLEKA  240
AAASALPEYS PRTLPSKRRR TTCFDTSCSS S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19196ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.19e-32bHLH family protein