PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023908034.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 759aa MW: 87406.9 Da PI: 8.5231

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023908034.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.7	1.1e-19	43	117	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +Y+ YAk++GF++r+ + ++s+++g++ +r+fvCskeg++++ +rtgC a ++v+++ gkw+++++ ++HnH+l XP_023908034.1 43 CYSLYAKRMGFKIRTGQLYRSRTDGSVSSRRFVCSKEGFQTN--------------SRTGCPAFIRVQRNAAGKWVIDHFFKDHNHDLE 117 79***********************************987..............589**************************96 PP
2	FAR1	58.7	2e-18	197	270	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 Y++Y+ + GF+vr+ + +s+++g+i +r+fvCskeg++++ +r+gC a +++k++++g+w+v++l+++HnH l XP_023908034.1 197 LYHSYGANKGFRVRIGQLFRSRHDGSISSRRFVCSKEGFQHP--------------SRVGCGAYMRIKRQESGTWVVDRLREDHNHGL 270 7************************************999..............4899************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 759 aa Download sequence
MVIKAKPVGM ICAIDNVNGE DGGSRLEPQV GLEFDSSDDA RECYSLYAKR MGFKIRTGQL 60 YRSRTDGSVS SRRFVCSKEG FQTNSRTGCP AFIRVQRNAA GKWVIDHFFK DHNHDLESTG 120 ENPTPVMQSK PPVVKKSLAD VTQRSKVKLL EDVEDRRPCP SGVINVKRVK RDGDDGQSKV 180 QPFLGLVFNS ANEAYQLYHS YGANKGFRVR IGQLFRSRHD GSISSRRFVC SKEGFQHPSR 240 VGCGAYMRIK RQESGTWVVD RLREDHNHGL GTQMETHKGS LNASNRFIEE VNGGLQNKDL 300 VTKYNKNLVK RWREKHNRSD WYHVLFEYFQ SKQAEDTGFF HAVEVNDGNC MSIFWADGRS 360 RYSCSQFGDA IVLDTSYKNS VYLVPFATFV GVNHHKQPVL LGCALIADES QESYTWLFKT 420 WLRAMSGRHP LSIIADEDKA IRQAIAEVFP GTHHRFSLWQ IKAKEREFLS SMDNGFKCEY 480 EKCTLHSQTA DEFDIAWNAL LSRYGLKENV WLKEMFESRA SWVPLYLRAT FFAGISMNES 540 IDSFFGTLLN AQTPIVEFVS RYERGLEQRR EEERKEDFDT YNLQAFLQTK EPVEEQCRRL 600 YTLTVFKIFQ KELLQSYSYL GFKIYEEGAN SRYLLRKCGN DNEKNIVTFC ASNLNVSCSC 660 QMFEFEGVLC RHALRVFQIL EIREVPSHYI LHRWTRNAEY GTVGDAESVG TSQELKALML 720 WSLRETACKY IEAGSASLEK YKLAYEIMRE GGRKLSWHR

Sequence ? help Back to Top

Protein Sequence Length: 759 aa Download sequence

MVIKAKPVGM ICAIDNVNGE DGGSRLEPQV GLEFDSSDDA RECYSLYAKR MGFKIRTGQL  60
YRSRTDGSVS SRRFVCSKEG FQTNSRTGCP AFIRVQRNAA GKWVIDHFFK DHNHDLESTG  120
ENPTPVMQSK PPVVKKSLAD VTQRSKVKLL EDVEDRRPCP SGVINVKRVK RDGDDGQSKV  180
QPFLGLVFNS ANEAYQLYHS YGANKGFRVR IGQLFRSRHD GSISSRRFVC SKEGFQHPSR  240
VGCGAYMRIK RQESGTWVVD RLREDHNHGL GTQMETHKGS LNASNRFIEE VNGGLQNKDL  300
VTKYNKNLVK RWREKHNRSD WYHVLFEYFQ SKQAEDTGFF HAVEVNDGNC MSIFWADGRS  360
RYSCSQFGDA IVLDTSYKNS VYLVPFATFV GVNHHKQPVL LGCALIADES QESYTWLFKT  420
WLRAMSGRHP LSIIADEDKA IRQAIAEVFP GTHHRFSLWQ IKAKEREFLS SMDNGFKCEY  480
EKCTLHSQTA DEFDIAWNAL LSRYGLKENV WLKEMFESRA SWVPLYLRAT FFAGISMNES  540
IDSFFGTLLN AQTPIVEFVS RYERGLEQRR EEERKEDFDT YNLQAFLQTK EPVEEQCRRL  600
YTLTVFKIFQ KELLQSYSYL GFKIYEEGAN SRYLLRKCGN DNEKNIVTFC ASNLNVSCSC  660
QMFEFEGVLC RHALRVFQIL EIREVPSHYI LHRWTRNAEY GTVGDAESVG TSQELKALML  720
WSLRETACKY IEAGSASLEK YKLAYEIMRE GGRKLSWHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	0.0	FAR1 family protein