PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023908039.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ZF-HD
Protein Properties Length: 177aa    MW: 19605.7 Da    PI: 8.0708
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023908039.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer89.43.3e-281059557
     ZF-HD_dimer  5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                     Y+eCl+NhAaslG++a+DGCgEf+ +   + +  +l+CaACgCHRnFHR+ +
  XP_023908039.1 10 IYRECLRNHAASLGSYATDGCGEFTLD---DISHGSLQCAACGCHRNFHRKVT 59
                    7*************************8...45689***************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MEGDNNTNDI YRECLRNHAA SLGSYATDGC GEFTLDDISH GSLQCAACGC HRNFHRKVTY  60
VPPHGRGLVL SCTSRDPSAD TTTADLMDYS GGSELGERSS SKKRFRTKFT PDQKEKMLAF  120
AEKLGWKLQR KDLEDEIERF CRGVGVSRQV FKVWMHNHKN SSSSSSASTG NASSLTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.12e-38ZF-HD family protein