PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023908944.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 307aa    MW: 35324.4 Da    PI: 9.1716
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023908944.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR159.51e-181393890
            FAR1  8 kevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                    +++GFsvrk+  k+  ++g+ ++rtf+Cskeg+r+ +k++ e  + +r+++r+gC a+++ +++kdg  ev +++++HnHela
  XP_023908944.1 13 TRIGFSVRKQFVKRA-KTGQLKRRTFCCSKEGERSVDKRR-ELVSFPRPVSRVGCLAQMTCQLQKDGMLEVVSFHEQHNHELA 93
                    589******998887.7788****************9999.99999***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MIVHMNFTKN MLTRIGFSVR KQFVKRAKTG QLKRRTFCCS KEGERSVDKR RELVSFPRPV  60
SRVGCLAQMT CQLQKDGMLE VVSFHEQHNH ELASSPIKHM SRSKREIAPA QKAIANDVER  120
PGISITQAID SLSMQAGGGE NLEFMNVDYK NSVHNERGTA LKKGDGRTVM EYFRKMQLED  180
PSFFYSIQVD DDNQIMNIFW ADARSIVDYG HFGDVICFDT TSRTNTYNRH FAPFVGVNHH  240
KQTLIFGATL LYSETIESYK WLFETFLSAM SWKQPRTILT DQSTAMAKAI AEVFPESNHR  300
LCVWHIY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-71FAR1 family protein