PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023909033.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YC
Protein Properties Length: 179aa    MW: 19589.9 Da    PI: 4.907
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023909033.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC55.51.3e-17171021899
           NF-YC  18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaee....nkrrtlkksdiaaavtrtdifdflvdivprd 99 
                     + +lPlar+kki+ ad d++  s++a  l++ a e+f+ +l  +s++  ++    + rr ++  d+a+av+r +  +fl+d+vp+ 
  XP_023909033.1  17 QVSLPLARVKKIIHADSDISNCSTNAAFLITVAAEMFLQHLVEQSYNIVKSertsKPRRNIQYRDVANAVARVENLEFLTDVVPKT 102
                     789******************************************97654311114599*************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MPYNNTPIAP TQEITGQVSL PLARVKKIIH ADSDISNCST NAAFLITVAA EMFLQHLVEQ  60
SYNIVKSERT SKPRRNIQYR DVANAVARVE NLEFLTDVVP KTITYKQYKE KVAKKEIVES  120
ASQGTLDKHM EGVEPSGNNS VRDGADTGAH TAMEIDDEDG QDTDGDVVIV GSKNRAGEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.34e-18NF-YC family protein