PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023909039.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 252aa MW: 29018.7 Da PI: 8.661

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023909039.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.3	2e-19	70	117	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+++++ +G ++W+tIa + g++R++k+c++rw++yl XP_023909039.1 70 KGAWTAEEDRKLAEVIAIHGAKRWTTIATKAGLNRCGKSCRLRWLNYL 117 79********************************************97 PP
2	Myb_DNA-binding	50.2	5.7e-16	123	168	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_023909039.1 123 RGNISDQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 168 78999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MIDRTKTTHP LHKYTKLPKP HKLSLSLSLA VNLDKHKQKL MDSMADRSIK REVKEMEAIN 60 SVSTKKEVNK GAWTAEEDRK LAEVIAIHGA KRWTTIATKA GLNRCGKSCR LRWLNYLRPN 120 IKRGNISDQE EDLILRLHKL LGNRWSLIAG RLPGRTDNEI KNYWNSHLSK KLRQEEKQSG 180 AATRDGYTVQ ENREEDKVNE EMSGEENTSK GVDDSKSDFD VDEFFDFSNE TTLNLEWVSQ 240 FLELDQGFSD VS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	4e-54	MYB family protein