PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023909708.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 371aa MW: 41495.1 Da PI: 5.2695

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023909708.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	41.9	3e-13	7	117	2	128
NAM 2 ppGfrFhPtdeelvve.yLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 p G++ h t e ++ + y +k + ++l+ + ik+ d ++++P++Lp ++f ++++ + ++g W+ +g+ e++ XP_023909708.1 7 PSGIESHSTAEKIIGClYKINKGDLRDLPS-NLIKDSDFFRYDPENLP-------PGMWFLIHSEV--------DGVYEHGKWSIKGEAYEIVL- 84 566666667777774413333334444555.67999999999999999.......23334444332........235688************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ ++ l++t+ fykg+ p+ ++t+Wvmheyr+ XP_023909708.1 85 DSMTTCLRTTFEFYKGQGPHERRTNWVMHEYRM 117 9999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MCPLPVPSGI ESHSTAEKII GCLYKINKGD LRDLPSNLIK DSDFFRYDPE NLPPGMWFLI 60 HSEVDGVYEH GKWSIKGEAY EIVLDSMTTC LRTTFEFYKG QGPHERRTNW VMHEYRMQRG 120 QFEGGNMKES NSLCGVFCDG EQSQNHEKQL KLGSTNTASE NHIHTTQSVV PNADNSIGQS 180 STSQPQVSVD DNRVMLAVME RSPDHQHQNL HEVEDHFEDG FIEMLDFENP LSPSSSSESS 240 CVTKSSDDWF DSGALIQEID SENNQRNAGY VSAPVKPNKV VVLPATSGSL NREKMLTPSE 300 ILKTDSSTPE PAVHRQGSEI PKPNLRNEGS SSNSHNLTLP FSSQIVAADQ ENTAAVARKR 360 KLRKYLCFMP F

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MCPLPVPSGI ESHSTAEKII GCLYKINKGD LRDLPSNLIK DSDFFRYDPE NLPPGMWFLI  60
HSEVDGVYEH GKWSIKGEAY EIVLDSMTTC LRTTFEFYKG QGPHERRTNW VMHEYRMQRG  120
QFEGGNMKES NSLCGVFCDG EQSQNHEKQL KLGSTNTASE NHIHTTQSVV PNADNSIGQS  180
STSQPQVSVD DNRVMLAVME RSPDHQHQNL HEVEDHFEDG FIEMLDFENP LSPSSSSESS  240
CVTKSSDDWF DSGALIQEID SENNQRNAGY VSAPVKPNKV VVLPATSGSL NREKMLTPSE  300
ILKTDSSTPE PAVHRQGSEI PKPNLRNEGS SSNSHNLTLP FSSQIVAADQ ENTAAVARKR  360
KLRKYLCFMP F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G54330.1	1e-14	NAC family protein