PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023910046.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 130aa    MW: 14503.7 Da    PI: 10.12
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023910046.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.92.4e-15431013796
                     EEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  37 tledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     t+ + +g+ We+ +  ++++++   + +GW+ F ++n+Lk+gD +vF+l++rs+++lv++v
  XP_023910046.1  43 TVLTYRGKNWEMSC--NGTQRThKKFDSGWRAFINDNNLKAGDACVFELIERSSKKLVFRV 101
                     567789********..7777776789************************99999898876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MAPCFTQASA FLSLHAMGNT RPWRLKGVPA KLHSIIPSLV VPTVLTYRGK NWEMSCNGTQ  60
RTHKKFDSGW RAFINDNNLK AGDACVFELI ERSSKKLVFR VQILRGDIPP EFQGKVSSEG  120
ESSNTPIVIE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.17e-09B3 family protein