PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023910430.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 249aa    MW: 27744.4 Da    PI: 8.7619
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023910430.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.95.4e-143680147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT eE++++++a +++  + Wk+I   +g  +t  q++s+ qky
   XP_023910430.1 36 RESWTDEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 80
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MNSQPTQNPQ SMATSSTPTD SSGKKVRKPY TITKSRESWT DEEHDKFLEA LQLFDRDWKK  60
IEDFVGSKTV IQIRSHAQKY FLKVQKNGTV AHVPPPRPKR KASHPYPQKA SKNVLMPLQG  120
SLAYPSSINN LASGYSPWDE TSMMINASSS QMVPSQDDFT SLHGIEADIA SKGVARISNS  180
IPKQGKQAPV LHGLPDFSEV YGFIGSVFDP EIDGHVQKLK EMDPINFETV LLLMRNLTVN  240
LSSPDFEPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-122MYB_related family protein