PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023910673.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 232aa    MW: 26404.9 Da    PI: 6.6815
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023910673.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.41e-1032572047
                     TTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwqky 47
                     G g+W++Iar+++ gRt++++k++w++ 
   XP_023910673.1 32 G-GNWSLIARRLP-GRTDNEIKNYWNTI 57
                     3.37*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MALLSKIFGR KVDVTNINNS KSDMHVYGED EGGNWSLIAR RLPGRTDNEI KNYWNTILSK  60
RVQGDKTHEQ SSRILKSIGR IGKLTSDSNP GIKPIAHLVI RPKVVWCTKV ILPWQLDNNN  120
QMFNENIVPY GNSKNLFPSV QLENNISDFL IDLDINYLLR SDMKNSDGHQ TNVHDIVLDL  180
PISGCDVKVK DLMDEGKPEN WRATNPFQPN EAMDLNTLAS FLDSEDTWIS RK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27920.12e-11MYB family protein