PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023910697.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 283aa MW: 32394.9 Da PI: 8.807

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023910697.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54	3.9e-17	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+++Ed++l++++k +G g W+ +++ g++R++k+c++rw +yl XP_023910697.1 13 RGAWSAWEDKILINYIKIHGEGKWTDLPQRAGLRRCGKSCRLRWMNYL 60 89********************************************97 PP
2	Myb_DNA-binding	53.9	4.1e-17	66	110	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++++E++l+++++k+lG+ W+ Iar+++ gRt++++k++w++ XP_023910697.1 66 RGNFSEDEEDLIIKLHKLLGNS-WSIIARRLP-GRTDNEIKNYWNTI 110 89****************99.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MGRRPCCAKG VIRGAWSAWE DKILINYIKI HGEGKWTDLP QRAGLRRCGK SCRLRWMNYL 60 RPDIKRGNFS EDEEDLIIKL HKLLGNSWSI IARRLPGRTD NEIKNYWNTI LSKRVQGDKT 120 HEQSSRILKS IGRIGKLTSD SNHGIKPVAH PVIRPKVMRC TKVILPWQPD NNNQMFNENI 180 VSYGNSKNLF PSVQPENNIS DFLIDLDINH LLRSDVTNSD GHQTNVQDNV LDLPVSGCDA 240 KLKDLMDEGK PENWRATNPF QPNEAMDLNT LASFLDLEDT WIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	3e-56	MYB family protein