PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023910831.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 210aa MW: 23934.1 Da PI: 8.8596

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023910831.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.5	8.5e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd++l d++k +G g W++ a++ ++R++k+c++rw +yl XP_023910831.1 14 KGLWTKEEDKILTDYIKVHGEGKWNLAAKKTDLKRCGKSCRLRWMNYL 61 678*******************************************97 PP
2	Myb_DNA-binding	59.2	8.9e-19	68	112	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g++T+eE++l+++++++lG++ W++Ia+ ++ gRt++q+k++w+++l XP_023910831.1 68 GSFTEEEEDLIIRLHNLLGNR-WSLIAKLVP-GRTDNQVKNYWNSHL 112 78*****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MTKKMMEEGN TYKKGLWTKE EDKILTDYIK VHGEGKWNLA AKKTDLKRCG KSCRLRWMNY 60 LSPNVKQGSF TEEEEDLIIR LHNLLGNRWS LIAKLVPGRT DNQVKNYWNS HLSKKLGLKK 120 QNSHLGVTGL NNSRTVIVSE TARTVSPCCN TSKAIEDEAS IGTQNFGKAL DSKESEISKS 180 YINSFWEYSE SDLDLSNPDG LLGWDFFNFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	2e-67	MYB family protein