PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023910969.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 211aa    MW: 24109.6 Da    PI: 8.8344
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023910969.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.91.4e-1171123155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++++h e+Er+RR+++ + +  Lr+ lP  +   ++K s ++   +A +YIk+L+
  XP_023910969.1  71 QKMMHREIERQRRQEMATLYVALRSFLPLEF--IKGKRSISDHINEAGNYIKHLE 123
                     6899*************************65..********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MFPLHQSNEL VFKVFSDPHH QHKISQDLIK GQASLDGSNF NTSKSMGKGL RRKLCENLDK  60
NFVNCNDNKK QKMMHREIER QRRQEMATLY VALRSFLPLE FIKGKRSISD HINEAGNYIK  120
HLEKKIKELS SARDVLKEFS NLSTTDQGNT SQPSCFTIHP CCGGVEIVIS SGFREESFPL  180
SKVLELLLEE GLTVLNCTSS KVNERFLHNV Q
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15172RRKLCENLDKNFVNCNDNKKQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.12e-36bHLH family protein