PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023911015.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 783aa MW: 89943.9 Da PI: 7.8296

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023911015.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.3	3.4e-25	79	169	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+YAk vGFs+rk++ k++k+n +t+r++vC keg+r +k++ + +r+ r+ trtgCka ++++ ++ +++w+v ++++ HnH+l+ XP_023911015.1 79 QFYNTYAKLVGFSIRKDEIKRNKNNI-VTSRRWVCAKEGFRPARKEDnLNCKREARPITRTGCKAAFRIRFDRrSNEWVVVEFKKVHNHDLV 169 6***************99996555.**********9998885788999************9998*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 783 aa Download sequence
MDHNTENSGK VVFIDVNDDA GKDVNNVIDN ECIMGQQGSG DATQNVQKHW STILDKGIDH 60 LTDADITGLR FSSLDDGGQF YNTYAKLVGF SIRKDEIKRN KNNIVTSRRW VCAKEGFRPA 120 RKEDNLNCKR EARPITRTGC KAAFRIRFDR RSNEWVVVEF KKVHNHDLVV QLQTQFLRSH 180 RHIKDSDKAY ITALHNVGIK SNQIMDNLIQ QAGGYENVGF IPKDLYNHVV ADQNSNMRDG 240 DAECALAYLQ AKVDMDSSFF YRYTVDKESR LANLFCTDSQ SRLDYECFGD VLAFDTTYKT 300 NVYKKPLVIL VGVNHHRQTT VFGCAVLVDE TVETYIWVLQ NLLLAMNNKT PISVVTDGDK 360 AMSAAIKSVF PESRHRLCVW HLDRNAFANL PNTEAYQSFI TCMVRYVTPD EFEDMWKKMV 420 DKHNLHNHEW LHEMYAKKKK WAEAYMRGHF FSGCRSTQRC EAMNAFFNRY VNKKTRLYQL 480 FQQVDRALTR IRHNEMGADF SSNYTEPILI TKLVKIEKHA ANILTREMFS MVQEEIMNEQ 540 TFIVLDSIES EGYRTYTLTQ YECPDSKWEV VYYPKDQHMK CSCLLFESYG YPCAHLFAIM 600 KAEHLKQIPP SCIMKRLLKT AKSDLSDKHE SQISPDVISM ARFSALSFSC SQMCFFGSRT 660 KEGFEELKVE IARLKCRMEE LYNSNINANG EGIHGRVGIK RNVRDPAIVK TKGDHGSTSN 720 SSAKVRRCSN CRDVGHTRRT CPSIHIHQGE HVDSDNSHEF MEQPASDAPV GSPNLRTDYV 780 GDI

Sequence ? help Back to Top

Protein Sequence Length: 783 aa Download sequence

MDHNTENSGK VVFIDVNDDA GKDVNNVIDN ECIMGQQGSG DATQNVQKHW STILDKGIDH  60
LTDADITGLR FSSLDDGGQF YNTYAKLVGF SIRKDEIKRN KNNIVTSRRW VCAKEGFRPA  120
RKEDNLNCKR EARPITRTGC KAAFRIRFDR RSNEWVVVEF KKVHNHDLVV QLQTQFLRSH  180
RHIKDSDKAY ITALHNVGIK SNQIMDNLIQ QAGGYENVGF IPKDLYNHVV ADQNSNMRDG  240
DAECALAYLQ AKVDMDSSFF YRYTVDKESR LANLFCTDSQ SRLDYECFGD VLAFDTTYKT  300
NVYKKPLVIL VGVNHHRQTT VFGCAVLVDE TVETYIWVLQ NLLLAMNNKT PISVVTDGDK  360
AMSAAIKSVF PESRHRLCVW HLDRNAFANL PNTEAYQSFI TCMVRYVTPD EFEDMWKKMV  420
DKHNLHNHEW LHEMYAKKKK WAEAYMRGHF FSGCRSTQRC EAMNAFFNRY VNKKTRLYQL  480
FQQVDRALTR IRHNEMGADF SSNYTEPILI TKLVKIEKHA ANILTREMFS MVQEEIMNEQ  540
TFIVLDSIES EGYRTYTLTQ YECPDSKWEV VYYPKDQHMK CSCLLFESYG YPCAHLFAIM  600
KAEHLKQIPP SCIMKRLLKT AKSDLSDKHE SQISPDVISM ARFSALSFSC SQMCFFGSRT  660
KEGFEELKVE IARLKCRMEE LYNSNINANG EGIHGRVGIK RNVRDPAIVK TKGDHGSTSN  720
SSAKVRRCSN CRDVGHTRRT CPSIHIHQGE HVDSDNSHEF MEQPASDAPV GSPNLRTDYV  780
GDI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-112	FAR1 family protein