PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023911086.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 220aa    MW: 25253.8 Da    PI: 6.0539
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023911086.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.3e-102976655
                    HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
             HLH  6 nerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                     ++E++RR++++  +++L +l+P++   +sk  ls  +   +A++YIksL+
  XP_023911086.1 29 RIIEKNRRNQMKILYSKLNSLIPNQ---NSKEaLSLPDQIDEAIKYIKSLE 76
                    68**********************8...66667****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MGRFLVINLQ EKEMDQQGSQ STSTKIERRI IEKNRRNQMK ILYSKLNSLI PNQNSKEALS  60
LPDQIDEAIK YIKSLETKLK KSKEEKESLS VNGRKRSYTC TSFDAKSSLK SPKMEIREMG  120
STLEVVLVTG LDNQFLFYEI IHILHEEQAE VLTANFSISG DSIFHVVHAE IKSGSLFDFG  180
AAKVTERLKR FIYGSTSDVD LEPELCWDLD IHPESWDFQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.15e-26bHLH family protein