PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023911310.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 274aa MW: 32044.3 Da PI: 7.8141

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023911310.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.7	4.9e-17	53	100	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W +eEdell v+++G ++W++Iar g++R++k+c++rw++yl XP_023911310.1 53 RGTWHEEEDELLSTFVTLMGERRWDSIARASGLKRSGKSCRLRWLNYL 100 89********************************************97 PP
2	Myb_DNA-binding	49.4	1.1e-15	109	151	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + eE+++++++++++G++ W++Iar+++ gRt++++k++w+++l XP_023911310.1 109 ISIEEEQIILRLHELWGNK-WSRIARRLP-GRTDNEIKNYWRTHL 151 577**************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MLPCNNFWSR HSLSFSRLLC HPVPHIKRLK LLLSLLQTTT AFKATMQGEK LRRGTWHEEE 60 DELLSTFVTL MGERRWDSIA RASGLKRSGK SCRLRWLNYL RPNLKRGHIS IEEEQIILRL 120 HELWGNKWSR IARRLPGRTD NEIKNYWRTH LRKKAQAQHE GNFYCKLNNG KQDFFFQKGD 180 MSGLNHNYEN HGTAEDFCGT TDDSFDALGL SKFSLISSPY ETQLSDPILE FIKDQSDIEH 240 HEGCNSLESC FCYPALIPDD SNIWDYAGFL WNMD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53200.1	1e-63	MYB family protein