PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023911599.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 226aa MW: 25742.7 Da PI: 7.0331

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023911599.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.4	3.2e-08	3	46	4	45
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 W Ed+++ +a + + + +W +Ia+ ++ g+++ ++k+++ XP_023911599.1 3 WNRSEDKIFEQALVMVPEDvpdRWQRIAEQIP-GKSPRDVKEHYD 46 999***************************.********95 PP
2	Myb_DNA-binding	48.4	2.2e-15	109	153	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + k++G+g+W++I+r + +Rt+ q+ s+ qky XP_023911599.1 109 PWTEEEHRLFLTGLKKFGKGDWRSISRNVVVTRTPTQVASHAQKY 153 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MMWNRSEDKI FEQALVMVPE DVPDRWQRIA EQIPGKSPRD VKEHYDDLVH DVLEIDCGRV 60 ELPSYADDND SDSGGHGGWD SPSNQNQISF SNHNNKPKHS DSERKKGTPW TEEEHRLFLT 120 GLKKFGKGDW RSISRNVVVT RTPTQVASHA QKYFLRQNSV KKERKRSSIH DITADNNPVA 180 LPVNQSWLPP PGSAVQQQQA YQPMTMPPHL PGQVSPMGYQ GFGFQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	5e-82	MYB family protein