PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023911687.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 86aa    MW: 9577.79 Da    PI: 9.5129
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023911687.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.69e-111055245
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     ++WT+ E + + +a + + ++   +W+ +a+ +g g+t++q+k ++ 
   XP_023911687.1 10 DSWTAKENKAFERALAVYDKDtpdRWHNVAKAVG-GKTPEQVKRHYE 55
                     58********************************.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 86 aa     Download sequence    
MASGSMSSSD SWTAKENKAF ERALAVYDKD TPDRWHNVAK AVGGKTPEQV KRHYELLVED  60
VKHIESGRVP LPKYKTTGSS PTVKDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.14e-38MYB_related family protein