PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023911714.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 308aa    MW: 34095 Da    PI: 8.7934
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023911714.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.41.2e-05167191123
                     EEET..TTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCp..dCgksFsrksnLkrHirtH 23 
                     y+C   dC+++F+r  + ++H r H
  XP_023911714.1 167 YTCRaeDCNRTFNRAGDRTKHERIH 191
                     99*********************99 PP
2zf-C2H217.51.2e-05200222123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     y+C+ C+k+F  + +L+rH   H
  XP_023911714.1 200 YECKRCSKTFMYPKDLRRHEAIH 222
                     99*****************9888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MDQLLSGLIS QAIPAPLHTT WSSDGSHRIA CLDFATPEDA AMVVGAVASL SLAERSQLKA  60
NYRTAKITQA IYEPVQSSQQ HLPSPNSSVH QTPLKRPISM RRGSEQFASL DSLSIHSSSK  120
QSTHASSVDP AGYTSGDSAT TMRSVYSGHS SLRPSRRRRL PASTAGYTCR AEDCNRTFNR  180
AGDRTKHERI HFPNAQSHPY ECKRCSKTFM YPKDLRRHEA IHDRREQPSV SHPRNNPAAG  240
ANISWCMRID ASTGGACKAI FMDREHEREH LRTSHGQGAD TFICPVCNIG GYSLRSDLLE  300
HLYIEHGD