PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023911877.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 189aa    MW: 22356.9 Da    PI: 8.2
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023911877.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.61.6e-0939622448
                     HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48
                     W++I+r+++ gRt++++k++w++yl
   XP_023911877.1 39 WSLISRRLP-GRTDNEIKNYWNTYL 62
                     *********.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MHGTTSSLNR QSPFAWFYCS ALERRDSQLK NDFYQYAWWS LISRRLPGRT DNEIKNYWNT  60
YLGKKVKGDD KKEKFGAVCG EAFFISIFEN TVSINFYIRM ESNQDSTALA QQVQALAATV  120
EELTRQNQEM KLRLQQEENR SKDNMEDEGN SHRRSDHRRL TPPDEQNSDL LREMRKQMDE  180
LRNAIKEKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G40330.13e-10MYB family protein