PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023911972.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family M-type_MADS
Protein Properties Length: 210aa    MW: 24812.2 Da    PI: 10.3117
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023911972.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF633.2e-20858151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+ien ++ qv fskRr  ++ K +E+SvLCd++ a+i fs++g+l  ++s
  XP_023911972.1  8 KKIENPTKCQVAFSKRRSSLFRKTHEISVLCDVDLALIAFSPSGRLNQFCS 58
                    68***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MGPKVDMKKI ENPTKCQVAF SKRRSSLFRK THEISVLCDV DLALIAFSPS GRLNQFCSQK  60
RIEDVMQRYI DLPPDKRFRH IKNIEKTQQM LSQLGHLKDE ESKMHYINNQ ISLTELKLKK  120
SKIEHEILAA NLRDYEPEPE RDPSLAQLLW CEKNLKTSLQ RVMNKKELCL GICHLHMRIS  180
QFRVMIRQSR WWGLVVKFLH LFPATVVRMN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77980.13e-30MIKC_MADS family protein