PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023912117.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 347aa MW: 38362.1 Da PI: 9.4775

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023912117.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.8	8.6e-53	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLk+k+++ +l++ ++i+e+d+yk++Pw+Lp+k+ +e+ewyfFs+rd+ky++g r+nra++sgyWkat +dk++l++ XP_023912117.1 15 LPPGFRFHPTDEELVVHYLKRKLASAPLPV-TIIAEIDLYKFDPWELPSKAMFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATVTDKPILTS 108 79**************************.89***********8777899*********************************998 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk Lvfy g+ pkg kt+W+mheyrl XP_023912117.1 109 nRTQKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 142 67888*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MESTDSSSGS QHPQLPPGFR FHPTDEELVV HYLKRKLASA PLPVTIIAEI DLYKFDPWEL 60 PSKAMFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATV TDKPILTSNR TQKVGVKKAL 120 VFYGGKPPKG IKTNWIMHEY RLVDNTSTSK PTTTASDATN KKGSLRLDDW VLCRIYKKNN 180 TQRPIMDQDK EDSMEAMIPT MPTMSMASQH NGKVPLPSKT ANYTALLDND SENYFDGILS 240 AEGMQNGSIS HNLATSSSKS STLAVKRTLP SQFWNETGSL GSSSSGGKLF HGYLNSGSAG 300 LDENNSFVSL LNQLPQGASF HPNSLLGSLG DGVLRQQFQL PSINWNS

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MESTDSSSGS QHPQLPPGFR FHPTDEELVV HYLKRKLASA PLPVTIIAEI DLYKFDPWEL  60
PSKAMFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATV TDKPILTSNR TQKVGVKKAL  120
VFYGGKPPKG IKTNWIMHEY RLVDNTSTSK PTTTASDATN KKGSLRLDDW VLCRIYKKNN  180
TQRPIMDQDK EDSMEAMIPT MPTMSMASQH NGKVPLPSKT ANYTALLDND SENYFDGILS  240
AEGMQNGSIS HNLATSSSKS STLAVKRTLP SQFWNETGSL GSSSSGGKLF HGYLNSGSAG  300
LDENNSFVSL LNQLPQGASF HPNSLLGSLG DGVLRQQFQL PSINWNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	1e-114	NAC family protein