PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023912132.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family Dof
Protein Properties Length: 289aa    MW: 31678 Da    PI: 9.2802
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023912132.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.39.7e-402888262
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    k++al+cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+s+
  XP_023912132.1 28 KDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRST 88
                    7899******************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MDTAQWPQGI GVVKPMEASR QMKTRPQKDQ ALNCPRCNST NTKFCYYNNY SLSQPRYFCK  60
TCRRYWTEGG SLRNVPVGGG SRKNKRSTSS TPPLASTSPA SSSKNKLPDL TSPPSFPQSA  120
SQNPKIHQGQ DLNLAYPPAH EDYNTISKFI EVPYSDNNNN NNNSSSKSHH QNPSTSSASP  180
QLSAMELLKT GITSRGLSSF MPMSVSDSSA MYSTGFPMHE FKPSLNFSLE GFQGGYGSSL  240
HQGVQETGAR LLFPIEDLKQ VPNTSEFDQN RGQGDSSGYW NGMLGGGSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.41e-49Dof family protein