PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023912133.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family Dof
Protein Properties Length: 274aa    MW: 30069.1 Da    PI: 9.2855
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023912133.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.48.8e-401373262
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    k++al+cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+s+
  XP_023912133.1 13 KDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRST 73
                    7899******************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MEASRQMKTR PQKDQALNCP RCNSTNTKFC YYNNYSLSQP RYFCKTCRRY WTEGGSLRNV  60
PVGGGSRKNK RSTSSTPPLA STSPASSSKN KLPDLTSPPS FPQSASQNPK IHQGQDLNLA  120
YPPAHEDYNT ISKFIEVPYS DNNNNNNNSS SKSHHQNPST SSASPQLSAM ELLKTGITSR  180
GLSSFMPMSV SDSSAMYSTG FPMHEFKPSL NFSLEGFQGG YGSSLHQGVQ ETGARLLFPI  240
EDLKQVPNTS EFDQNRGQGD SSGYWNGMLG GGSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.49e-50Dof family protein