PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023912167.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 258aa    MW: 30105.9 Da    PI: 4.1928
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023912167.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM123.32.1e-381052321128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     l pG+rF P+d  l+v+yL +kv + +l+  + ++++ ++y+++P  +  +  + eek wyfF++r++ky++gkr+nr+t +gyWkatg dk+++
  XP_023912167.1 105 LIPGCRFCPSDYILIVHYLINKVLNYPLPY-DWVEDAeELYNHNPGLIAeQYGNREEKAWYFFTPRKQKYQNGKRPNRVTGNGYWKATGADKAIK 198
                     579***************************.77777769*********8344455777************************************* PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     s k+ ++g k+ Lvfy+g+ ++g kt+W+++ey++
  XP_023912167.1 199 S-KEIVIGHKRKLVFYEGKPQSGDKTNWIVDEYTI 232
                     *.999****************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MCIPLENSSE SDHDSDHTNN YESESPTSPL YSSISDTSFS SSPSGTFYFD DDEGEESDEE  60
EEEPDEEEEN QSLEEVDVSV LKTFLNDKLH QLGEEPQMEY PELDLIPGCR FCPSDYILIV  120
HYLINKVLNY PLPYDWVEDA EELYNHNPGL IAEQYGNREE KAWYFFTPRK QKYQNGKRPN  180
RVTGNGYWKA TGADKAIKSK EIVIGHKRKL VFYEGKPQSG DKTNWIVDEY TIDHPITEND  240
MRLDNWILCR LYQRNERS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.23e-41NAC family protein