PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023912222.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 381aa    MW: 42314.1 Da    PI: 4.8753
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023912222.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.44e-1685134255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r +h++ E+rRR++iN++f+ Lr l+P++    ++K +Ka+ L +++eY++ Lq
  XP_023912222.1  85 RSKHSQTEQRRRSKINERFQILRNLIPQN----DQKRDKASFLLEVIEYVQFLQ 134
                     899*************************9....9*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MVKSAKIHQF EHHEEEFEDD DEGEEEEDEE DDGDGDGDGG GRNNNSNSNS NSSSSLLNRT  60
TPRSRVRVGG KSSSTTQNQR STAHRSKHSQ TEQRRRSKIN ERFQILRNLI PQNDQKRDKA  120
SFLLEVIEYV QFLQEKLNTY EGDYRGWNPE PKKLIPWRNH RGPAESFMDH SQVIRNGFGL  180
ENNVDPPAIL SNAQNSTESE LATEVVYKVL DHLTGSTTPP VPLNVQTKPN MFDIVCRGGM  240
PTETLQESIS DAENLPSQPQ PQWWHARPYA TECAVPTNLL NVREELAVDS GSDSISSAYS  300
QGILNSLTGA LQSSGVDLSQ ASISVQVNVG KRSNSGPISV ASNSKDHEKQ SMDDQVMVHT  360
GVGSCSNESE LAHKRLRTEE S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.19e-54bHLH family protein