PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023912232.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 221aa MW: 25729.9 Da PI: 6.1594

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023912232.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.8	1.1e-17	12	59	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll ++vk++G g+W++++ g++R++k+c++rw +yl XP_023912232.1 12 KGPWTPEEDRLLGEYVKLHGEGRWSSVPGSTGLNRSGKSCRLRWVNYL 59 79********************************************97 PP
2	Myb_DNA-binding	46.1	1.2e-14	66	109	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g T+ E+ + v+ ++++G++ W+tIar+++ gRt++++k++w+++ XP_023912232.1 66 GQLTPLEEGIVVEMHALWGNK-WSTIARYLP-GRTDNEIKNYWRTH 109 667999*************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MGWGIPEQGW RKGPWTPEED RLLGEYVKLH GEGRWSSVPG STGLNRSGKS CRLRWVNYLR 60 PGLKKGQLTP LEEGIVVEMH ALWGNKWSTI ARYLPGRTDN EIKNYWRTHF KKKGKSSKKQ 120 DMEKAQTLKQ TQPPRKQEQE PKEYSMKREA ISDEDTSDEQ MSSEARGTQE MFVIKEYPTL 180 EDQCFSVMSQ DVALWLDTVR EDDFCFSLWN LDDPKGDLDH D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30210.1	1e-64	MYB family protein