PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023912293.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 88aa    MW: 10609.1 Da    PI: 10.1511
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023912293.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.33.5e-083069445
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     +T++E++l+ +  ++ G + W++Ia +++ gR ++++  +w 
   XP_023912293.1 30 MTEQEEDLICRMYRLVGDR-WDLIAGRIP-GRKPEDIERFWI 69
                     7****************99.*********.*********995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MDKRPRKQAK TRSSTSEAEV SSIEWDFIKM TEQEEDLICR MYRLVGDRWD LIAGRIPGRK  60
PEDIERFWIM RHGEVFAEKR NKHRTKNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.12e-38MYB_related family protein